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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. CDC16, cell division cycle 16 homolog (S. cerevisiae)
Sequence ID:NM_001078645
NM_003903
Entrez Gene ID:8881
Ensembl ID:ENSG00000130177

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:13q34Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:13: 115000555 - 115038150

 Exon Info From UCSC:
NM_001078645
NM_003903

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3879150Full LengthBC010875cell division cycle 16 homolog (S. cerevisiae)
4877392Full LengthBC017244cell division cycle 16 homolog (S. cerevisiae)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003894  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001078645 NP_001072113 Q13042  
NM_003903 NP_003894   TPR_1
TPR_2

Related Sequences

 
mRNAGenPeptSwissProt
U18291 AAC50200 Q13042
AF164598 AAD45156 Q13042
BC010875 AAH10875 Q7Z651
BC017244 AAH17244 Q13042
AB209850 BAD93087 Q59EG1
AK315302 BAG37707 B2RCW0
AK296424 BAG59086 B4DK74

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CDC16 NP_003894 R.norvegicus Cdc16 290875   NP_001019915 96
M.musculus Cdc16 69957 Gene Info NP_081552 95
A.gambiae AgaP_AGAP004623 1275908   XP_315195 51
D.melanogaster cdc16 42753   NP_477397 48
A.thaliana APC6 844213   NP_565188 45
S.pombe cut9 2541592   NP_593301 38
N.crassa NCU01377 3877095   XP_960934 36
S.cerevisiae CDC16 853846   NP_012903 33

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)