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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. NDRG1, N-myc downstream regulated 1
Sequence ID:NM_001135242
NM_001258432
NM_001258433
NM_006096
RefSeqGene ID:NG_007943
Entrez Gene ID:10397
Ensembl ID:ENSG00000104419

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:8q24.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:8: 134249417 - 134296574

 Exon Info From UCSC:
NM_001135242
NM_006096

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2957847Full LengthBC003175N-myc downstream regulated 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006087  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001135242 NP_001128714    
NM_001258432 NP_001245361    
NM_001258433 NP_001245362    
NM_006096 NP_006087 Q92597 Ndr

Related Sequences

 
mRNAGenPeptSwissProt
AF004162 AAC13419 Q92597
AF230380 AAF71305 Q92597
BC003175 AAH03175 Q92597
AY277597 AAQ18036 Q597H1
DQ892952 ABM83878  
DQ896199 ABM87198  
D87953 BAA13505 Q92597
AK095649 BAC04597 Q8N959
AK223542 BAD97262 Q53EU7
AK091147 BAG52292 B3KR80
AK096562 BAG53324 B3KU62
AK124709 BAG54074 B3KWB2
AK126924 BAG54400 Q92597
AK296794 BAH12432 B7Z446
AK297342 BAH12556 B7Z4H0
AK298236 BAH12741 B7Z505
AK299636 BAH13083 B7Z5Z7
X92845 CAA63430 Q92597
CR456842 CAG33123 Q92597

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens NDRG1 NP_001128714 M.musculus Ndrg1 17988 Gene Info NP_032707 94
R.norvegicus Ndrg1 299923   NP_001011991 93
A.thaliana NDL2 831051   NP_568251 32

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)