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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. NR1D2, Nuclear receptor subfamily 1, group D, member 2
Sequence ID:NM_005126
NM_001145425
Entrez Gene ID:9975
Ensembl ID:ENSG00000174738

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3p24.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 23996104 - 24019976

 Exon Info From UCSC:
NM_005126
NM_001145425

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4373827Full LengthBC070035nuclear receptor subfamily 1, group D, member 2
5274113Full LengthBC045613nuclear receptor subfamily 1, group D, member 2
3912370IncompleteBC015929nuclear receptor subfamily 1, group D, member 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005117  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001145425 NP_001138897    
NM_005126 NP_005117   Hormone_recep
zf-C4

Related Sequences

 
mRNAGenPeptSwissProt
L31785 AAA65937 Q14995
BC015929 AAH15929 Q96B66
BC045613 AAH45613 Q14995
BC070035 AAH70035 Q6NSM0
HQ692830 ADZ17341 F1D8P2
HQ692831 ADZ17342 B4DXD3
D16815 BAA20088 Q14995
AB209091 BAD92328 Q59GL8
AK313464 BAG36250 Q14995
AK293273 BAG56802 B4DDP1
AK301925 BAG63345 B4DXD3
AB307693 BAH02284 B6ZGS3
CR457434 CAG33715 Q6I9S1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens NR1D2 NP_005117 M.musculus Nr1d2 353187 Gene Info NP_035714 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)