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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. NSMAF, neutral sphingomyelinase (N-SMase) activation associated factor
Sequence ID:NM_001144772
NM_003580
Entrez Gene ID:8439
Ensembl ID:ENSG00000035681

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, pancreas, pancreatic islet, peripheral nervous system, placenta, pooled tissue, prostate, skin, soft tissue, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:8q12-q13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:8: 59497898 - 59499519

 Exon Info From UCSC:
NM_001144772
NM_003580

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5785460Full LengthBC041124neutral sphingomyelinase (N-SMase) activation associated factor

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003571  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001144772 NP_001138244    
NM_003580 NP_003571 Q92636 WD40
Beach
GRAM

Related Sequences

 
mRNAGenPeptSwissProt
BC041124 AAH41124 Q92636
AK292679 BAF85368 A8K9G4
AK313991 BAG36703 B2RA06
AK294009 BAG57371 Q92636
X96586 CAA65405 Q92636

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens NSMAF NP_003571 M.musculus Nsmaf 18201 Gene Info NP_035075 92
R.norvegicus Nsmaf 353233   NP_852054 91
A.gambiae AgaP_AGAP000429 1271816   XP_310670 41

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta