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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PHF16, PHD finger protein 16
Sequence ID:NM_001077445
NM_014735
RefSeqGene ID:NG_013324
Entrez Gene ID:9767
Ensembl ID:ENSG00000102221

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:Xp11.23Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:X: 46772124 - 46920640

 Exon Info From UCSC:
NM_001077445
NM_014735

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40081796Full LengthBC114487PHD finger protein 16
40081799Full LengthBC113880PHD finger protein 16

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_055550  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001077445 NP_001070913    
NM_014735 NP_055550 Q92613 PHD

Related Sequences

 
mRNAGenPeptSwissProt
AF127774 AAD51905 Q92613
BC113880 AAI13881 Q92613
BC114487 AAI14488 Q92613
D86969 BAA13205 Q92613
AK291220 BAF83909 A8K5A5
BN000289 CAE30502 Q92613

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PHF16 NP_001070913 M.musculus Phf16 382207 Gene Info NP_955021 82

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)