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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. GSX2, GS homeobox 2
Sequence ID:NM_133267
Entrez Gene ID:170825
Ensembl ID:ENSG00000180613

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4q12Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:4: 54966197 - 54968122

NM_133267 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
18385496624754967084
83912125496774854968121

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30915389Full LengthBC075089GS homeobox 2
30915601Full LengthBC075090GS homeobox 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_573574  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_133267 NP_573574 Q9BZM3 Homeobox

Related Sequences

 
mRNAGenPeptSwissProt
BC075089 AAH75089 Q9BZM3
BC075090 AAH75090 Q9BZM3
EU446852 ABZ92381  
EU596451 ACC61188 B2LYG3
AB028838 BAB84822 Q9BZM3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens GSX2 NP_573574 M.musculus Gsx2 14843 Gene Info NP_573555 89
R.norvegicus Gsx2 364140   NP_001131035 89

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)