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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ACTR5, ARP5 actin-related protein 5 homolog (yeast)
Sequence ID:NM_024855
Entrez Gene ID:79913
Ensembl ID:ENSG00000101442

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:20q11.23Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:20: 37377111 - 37400812

NM_024855 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
14003737709637377495
4016303737865237378881
6318003738077337380942
80110183738359937383816
101912013738449937384681
120213183739404437394160
131914583739488037395019
145915913739610637396238
159224793740020137401088

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5198236Full LengthBC038402ARP5 actin-related protein 5 homolog (yeast)
3456442IncompleteBC001324ARP5 actin-related protein 5 homolog (yeast)
3835144IncompleteBC006162ARP5 actin-related protein 5 homolog (yeast)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_079131  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_024855 NP_079131 Q9H9F9 Actin

Related Sequences

 
mRNAGenPeptSwissProt
BC001324 AAH01324 Q9H9F9
BC006162 AAH06162 Q9H9F9
BC038402 AAH38402 Q9H9F9
AY211911 AAO65164 Q9H9F9
AK022847 BAB14270 Q9H9F9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ACTR5 NP_079131 R.norvegicus Actr5 362258   NP_001102070 93
M.musculus Actr5 109275 Gene Info NP_780628 89
A.gambiae AgaP_AGAP004488 1274635   XP_313786 49
D.melanogaster Arp5 42173   NP_650684 42
S.pombe arp5 2541031   NP_596039 39
A.thaliana ARP5 820416   NP_001189870 36
N.crassa NCU06394 3878380   XP_962232 35
S.cerevisiae ARP5 855665   NP_014339 31

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)