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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CWC27, CWC27 spliceosome-associated protein homolog (S. cerevisiae)
Sequence ID:NM_005869
Entrez Gene ID:10283
Ensembl ID:ENSG00000153015

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5q12.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 64064793 - 64314403

 Exon Info From UCSC:
NM_005869

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4552442Full LengthBC012117serologically defined colon cancer antigen 10

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005860  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_005869 NP_005860 Q6UX04 EC 5.2.1.8 Pro_isomerase

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF039692 AAC18041 Q6UX04 EC 5.2.1.8
AF039693 AAC18042 Q6UX04 EC 5.2.1.8
BC012117 AAH12117 Q6UX04 EC 5.2.1.8
AY358569 AAQ88932 Q6UX04 EC 5.2.1.8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CWC27 NP_005860 M.musculus Cwc27 67285 Gene Info NP_080348 91
R.norvegicus Cwc27 361887   NP_001013217 90
A.gambiae AgaP_AGAP007704 1269530   XP_308172 52
D.melanogaster CG10907 39331   NP_648508 51
C.elegans cyn-16 174843   NP_496562 48
A.thaliana AT4G33060 829443   NP_195032 45
N.crassa NCU08514 3879312   XP_963164 43
S.pombe cyp7 2540067   NP_595943 41

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)