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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TCF3, transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47)
Sequence ID:NM_001136139
NM_003200
RefSeqGene ID:NG_029953
Entrez Gene ID:6929
Ensembl ID:ENSG00000071564

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19p13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 1609291 - 1610193

 Exon Info From UCSC:
NM_001136139
NM_003200

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40007777Full LengthBC110579transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47)
40007779Full LengthBC110580transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47)
3534334IncompleteBC005166transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47)
4110737IncompleteBC011665transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003191  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001136139 NP_001129611    
NM_003200 NP_003191 P15923 HLH

Related Sequences

 
mRNAGenPeptSwissProt
M31222 AAA52331 P15923
M24404 AAA56829 P15923
M24405 AAA56830 P15923
M31523 AAA61146 P15923
M65214 AAC41693 P15923
BC011665 AAH11665 Q6PJU3
BC110580 AAI10581 Q2TB39
X52078 CAA36297 P15923

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TCF3 NP_003191 M.musculus Tcf3 21423 Gene Info NP_001157621 84
R.norvegicus Tcfe2a 171046   NP_001030314 81

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)