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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. LBX1, Ladybird homeobox 1
Sequence ID:NM_006562
RefSeqGene ID:NG_009236
Entrez Gene ID:10660
Ensembl ID:ENSG00000138136

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10q24Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:10: 102987345 - 102987479

NM_006562 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
4817102986733102987546
8181287102988247102988716

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
7217017Full LengthBC069156ladybird homeobox 1
9020308Full LengthBC136321ladybird homeobox 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006553  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_006562 NP_006553 P52954 Homeobox

Related Sequences

 
mRNAGenPeptSwissProt
BC069156 AAH69156 P52954
BC136321 AAI36322 P52954
AJ004949 CAA06237 O60863
X74863 CAA52856 Q6LBH2
X90828 CAA62342 P52954

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens LBX1 NP_006553 M.musculus Lbx1 16814 Gene Info NP_034821 97
R.norvegicus Lbx1 499362   NP_001040573 97

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)