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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PTN, pleiotrophin
Sequence ID:NM_002825
Entrez Gene ID:5764
Ensembl ID:ENSG00000105894

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7q33Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:7: 136912442 - 137028375

NM_002825 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
14744136912091136912821
745906136935976136936137
9071080136938210136938383
10811196136939605136939720
11971558137028184137028545

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4248708Full LengthBC005916pleiotrophin

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002816  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_002825 NP_002816 P21246 PTN_MK_C
PTN_MK_N

Related Sequences

 
mRNAGenPeptSwissProt
M57399 AAA35961 P21246
BC005916 AAH05916 P21246
BT019692 AAV38498 P21246
D90226 BAA14261 P21246
AK290488 BAF83177 P21246
AK313424 BAG36216 P21246
X52946 CAA37121 P21246
CR450338 CAG29334 P21246
AM392897 CAL37775  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PTN NP_002816 M.musculus Ptn 19242 Gene Info NP_032999 98
R.norvegicus Ptn 24924   NP_058762 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)