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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SGCE, sarcoglycan, epsilon
Sequence ID:NM_001099400
NM_001099401
NM_003919
RefSeqGene ID:NG_008893
Entrez Gene ID:8910
Ensembl ID:ENSG00000127990

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
DYSTONIA, MYOCLONICDRD2

Cytogenetic Location (from UniGene)

Cytogenetic Location:7q21.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:7: 94214723 - 94285373

 Exon Info From UCSC:
NM_001099400
NM_001099401
NM_003919

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4822278Full LengthBC021709sarcoglycan, epsilon

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003910  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001099400 NP_001092870    
NM_001099401 NP_001092871    
NM_003919 NP_003910 O43556 Sarcoglycan_2

Related Sequences

 
mRNAGenPeptSwissProt
AF036364 AAC04368 O43556
AF031920 AAC14021 O43556
BC021709 AAH21709 O43556
AF516515 AAM64204 O43556
AY359042 AAQ89401 O43556
DQ894063 ABM84989  
EU176189 ABW03640  
AB117974 BAD21206 Q6L8P0
AK313438 BAG36229 O43556
AK298220 BAG60490 B4DP78
AK295021 BAH11950 B7Z2R4
AJ000534 CAA04167 O43556

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SGCE NP_003910 M.musculus Sgce 20392 Gene Info NP_001123660 96

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)