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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. LAPTM5, Lysosomal protein transmembrane 5
Sequence ID:NM_006762
Entrez Gene ID:7805
Ensembl ID:ENSG00000162511

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1p34Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 31205890 - 31230633

NM_006762 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
114503120531431206763
145115433120801931208111
154416393121045031210545
164017623121178631211908
176318913121265531212783
189219683121448631214562
196920623121530231215395
206322403123050531230682

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40030918Full LengthBC106896lysosomal multispanning membrane protein 5
40030919Full LengthBC106897lysosomal multispanning membrane protein 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006753  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_006762 NP_006753 Q13571
Q5TBB8
Mtp

Related Sequences

 
mRNAGenPeptSwissProt
U30498 AAA74018 Q13571
U51240 AAB08975 Q13571
Q5TBB8
BC106896 AAI06897 Q13571
BC106897 AAI06898 Q13571
Q5TBB8
D42042 BAA07643 Q13571
AK292009 BAF84698 Q5TBB8
AK297014 BAG59547 B4DLI5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens LAPTM5 NP_006753 R.norvegicus Laptm5 89783   NP_445990 80
M.musculus Laptm5 16792 Gene Info NP_034816 79

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)