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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TMIGD1, Transmembrane and immunoglobulin domain containing 1
Sequence ID:NM_206832
Entrez Gene ID:388364
Ensembl ID:ENSG00000182271

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17q11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 28643365 - 28661077

NM_206832 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
13432864336528643707
3443842864421028644250
3854882864582728645930
4897672865183328652111
76810462865626828656546
104711532865906928659175
115412012866101728661064

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9021198Full LengthBC137201transmembrane and immunoglobulin domain containing 1
9021199Full LengthBC137202transmembrane and immunoglobulin domain containing 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_996663  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_206832 NP_996663 Q6UXZ0 ig

Related Sequences

 
mRNAGenPeptSwissProt
BC137201 AAI37202  
BC137202 AAI37203  
AY358153 AAQ88520 Q6UXZ0
AK172838 BAD18803 Q6UXZ0
AK290266 BAF82955 Q6UXZ0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TMIGD1 NP_996663 R.norvegicus Tmigd1 363654   NP_001128501 75
M.musculus Tmigd1 66601 Gene Info NP_079931 74

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)