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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TMPRSS6, Transmembrane protease, serine 6
Sequence ID:NM_153609
RefSeqGene ID:NG_012856
Entrez Gene ID:164656
Ensembl ID:ENSG00000187045

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
IRON-REFRACTORY IRON DEFICIENCY ANEMIA 

Cytogenetic Location (from UniGene)

Cytogenetic Location:22q12.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:22: 37462084 - 37499461

 Exon Info From UCSC:
NM_153609

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5164881Full LengthBC039082transmembrane protease, serine 6

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_153609 NP_705837 Q8IU80  

Related Sequences

 
mRNAGenPeptSwissProt
BC039082 AAH39082 Q8IU80
AY055384 AAL16414 Q8IU80
AY358398 AAQ88764 Q8IU80
AJ319876 CAC85953 Q8IU80
CR456446 CAG30332 Q8IU80
CU013044 CAK54475  
CU013332 CAK54774  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TMPRSS6 NP_705837 R.norvegicus Tmprss6 315388   NP_001124028 86
M.musculus Tmprss6 71753 Gene Info NP_082178 84

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)