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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. FUCA1, Fucosidase, alpha-L- 1, tissue
Sequence ID:NM_000147
RefSeqGene ID:NG_013346
Entrez Gene ID:2517
Ensembl ID:ENSG00000179163

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, placenta, pooled tissue, prostate, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Associated Diseases (from OMIM)

DiseaseOther Genes
FUCOSIDOSIS 

Cytogenetic Location (from UniGene)

Cytogenetic Location:1p34Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 24171571 - 24194780

NM_000147 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
197902417157324172344
7918902417256324172662
89110812417513824175328
108212822418084924181049
128313882418628724186392
138915262418962324189760
152716612419198024192114
166221332419438724194858

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4871788Full LengthBC017338fucosidase, alpha-L- 1, tissue

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000138  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_000147 NP_000138 P04066 EC 3.2.1.51 Alpha_L_fucos

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
M29877 AAA35519 P04066 EC 3.2.1.51
M10355 AAA52482 P04066 EC 3.2.1.51
BC017338 AAH17338 P04066 EC 3.2.1.51
HQ448155 ADQ32636    
AK092914 BAC04002 P04066 EC 3.2.1.51
AB074175 BAE45738 P04066 EC 3.2.1.51
AK314649 BAG37210 B2RBG3  
AK295535 BAH12098 B7Z362  
AK301302 BAH13453 B5MDC5  
X01390 CAA25646 P04066 EC 3.2.1.51

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens FUCA1 NP_000138 M.musculus Fuca1 71665 Gene Info NP_077205 84
R.norvegicus Fuca1 24375   NP_036694 81

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)