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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. OSBPL1A, oxysterol binding protein-like 1A
Sequence ID:NM_001242508
NM_018030
NM_080597
NM_133268
RefSeqGene ID:NG_029432
Entrez Gene ID:114876
Ensembl ID:ENSG00000141447

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:18q11.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:18: 21742010 - 21852196

 Exon Info From UCSC:
NM_018030
NM_080597

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9020441Full LengthBC136452oxysterol binding protein-like 1A
9052637Full LengthBC144117oxysterol binding protein-like 1A
4044188IncompleteBC007004oxysterol binding protein-like 1A
4370860IncompleteBC073854oxysterol binding protein-like 1A

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_060500  NP_542164  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001242508 NP_001229437    
NM_018030 NP_060500 Q6GSK5 Oxysterol_BP
NM_080597 NP_542164 Q9BXW6 Ank
Oxysterol_BP

Related Sequences

 
mRNAGenPeptSwissProt
AF323726 AAG53407 Q9BXW6
BC007004 AAH07004 Q96IZ3
BC041563 AAH41563 Q8IVZ3
BC063420 AAH63420 Q6GSK5
BC073854 AAH73854 Q6DKJ0
BC098384 AAH98384 Q6GSK5
BC136452 AAI36453 B0YJ56
BC144117 AAI44118 B7ZLX8
AF274714 AAK15154 Q6GSK5
Q9BXW6
AF392449 AAL40662 Q9BXW6
AF392450 AAL40663 Q9BXW6
AK292895 BAF85584 A8KA30
AK314552 BAG37138 B2RB91
AK096358 BAG53273 B3KU11
AK301862 BAH13569 B7Z7D3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens OSBPL1A NP_542164 M.musculus Osbpl1a 64291 Gene Info NP_997413 92
A.gambiae AgaP_AGAP007687 1269542   XP_308184 60
D.melanogaster CG3860 37825   NP_611865 56

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)