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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. CALCA, calcitonin-related polypeptide alpha
Sequence ID:NM_001033952
NM_001033953
NM_001741
RefSeqGene ID:NG_015960
Entrez Gene ID:796
Ensembl ID:ENSG00000110680

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11p15.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 14990087 - 14993832

 Exon Info From UCSC:
NM_001033952
NM_001033953
NM_001741

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
7262481Full LengthBC069704calcitonin-related polypeptide alpha
7262493Full LengthBC069760calcitonin-related polypeptide alpha
7262505Full LengthBC069778calcitonin-related polypeptide alpha
7262564Full LengthBC069684calcitonin-related polypeptide alpha
7939598Full LengthBC093753calcitonin-related polypeptide alpha
8069105Full LengthBC101599calcitonin-related polypeptide alpha
9052073Full LengthBC143562calcitonin-related polypeptide alpha

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001732  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001033952 NP_001029124 P01258  
NM_001033953 NP_001029125 P06881  
NM_001741 NP_001732 P01258 Calc_CGRP_IAPP

Related Sequences

 
mRNAGenPeptSwissProt
M26095 AAA35501 P01258
K03512 AAA52011 P06881
K03513 AAA52124 P01258
M64486 AAA58403 P01258
BC069684 AAH69684 P01258
BC069704 AAH69704 P01258
BC069760 AAH69760 P01258
BC069778 AAH69778 P01258
BC093753 AAH93753 P01258
BC101599 AAI01600 P01258
BC143562 AAI43563 P01258
HQ448410 ADQ32890  
X00356 CAA25103 P01258
X02330 CAA26189 P01258
X02330 CAA26190 P06881
X03662 CAA27299 P01258

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CALCA NP_001029124 R.norvegicus Calca 24241   NP_059034 79
M.musculus Calca 12310 Gene Info NP_031613 79

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)