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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CADM1, cell adhesion molecule 1
Sequence ID:NM_001098517
NM_014333
Entrez Gene ID:23705
Ensembl ID:ENSG00000182985

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, skin, stem cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:11q23.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 115051365 - 115054518

 Exon Info From UCSC:
NM_001098517
NM_014333

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5248100Full LengthBC047021cell adhesion molecule 1
40118330Full LengthBC125103cell adhesion molecule 1
40118328IncompleteBC125102cell adhesion molecule 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_055148  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001098517 NP_001091987    
NM_014333 NP_055148 Q9BY67 ig
V-set
C2-set_2

Related Sequences

 
mRNAGenPeptSwissProt
AF132811 AAF69029 Q9BY67
BC047021 AAH47021 A0A4Z1
BC125102 AAI25103 A4FVB5
BC125103 AAI25104  
AY309502 AAQ81866  
AY358334 AAQ88700  
AK075502 BAC11657 Q9BY67
AB094146 BAC66178 Q9BY67
BX641042 CAE46024 Q6MZK6
CR457157 CAG33438 Q9BY67
HE586496 CCD32610 H1ZZV9
HE586497 CCD32611 F5H0J4
HE586498 CCD32612 H1ZZW1
HE586499 CCD32613 H1ZZW2
HE586500 CCD32614 H1ZZW3
HE586501 CCD32615 H1ZZW4
HE586503 CCD32617 H1ZZW6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CADM1 NP_055148 M.musculus Cadm1 54725 Gene Info NP_997558 99
R.norvegicus Cadm1 363058   NP_001012201 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)