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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. B4GALT5, UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5
Sequence ID:NM_004776
Entrez Gene ID:9334
Ensembl ID:ENSG00000158470

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, salivary gland, skin, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:20q13.1-q13.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:20: 48252216 - 48330338

NM_004776 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1935304824948448252995
353136324825387748253978
363337554825621448256336
375639434825701448257201
394440604825900448259120
406141854826006248260186
418642994826350148263614
430044344827310448273238
443547434833011248330420

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8143990Full LengthBC104987UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5
8327733Full LengthBC112265UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5
30915234Full LengthBC074873UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5
30915537Full LengthBC074821UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004767  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_004776 NP_004767 O43286 Galactosyl_T_2

Related Sequences

 
mRNAGenPeptSwissProt
AF038663 AAC39736 O43286
BC074821 AAH74821 O43286
BC074873 AAH74873 O43286
BC104987 AAI04988 O43286
BC112265 AAI12266 O43286
AF289556 AAL55740 Q8WZ36
HQ258208 ADR82962  
AB004550 BAA25006 O43286

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens B4GALT5 NP_004767 M.musculus B4galt5 56336 Gene Info NP_062809 95
C.elegans W02B12.11 174754   NP_496449 37

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)