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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. ABCB7, ATP-binding cassette, sub-family B (MDR/TAP), member 7
Sequence ID:NM_001271696
NM_001271697
NM_001271698
NM_001271699
NM_004299
RefSeqGene ID:NG_007980
Entrez Gene ID:22
Ensembl ID:ENSG00000131269

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, placenta, pooled tissue, prostate, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:Xq13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:X: 74273117 - 74376114


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4138236Full LengthBC006323ATP-binding cassette, sub-family B (MDR/TAP), member 7

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004290  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001271696 NP_001258625 O75027  
NM_001271697 NP_001258626    
NM_001271698 NP_001258627    
NM_001271699 NP_001258628    
NM_004299 NP_004290   ABC_tran
ABC_membrane

Related Sequences

 
mRNAGenPeptSwissProt
AF038950 AAC39865 O75027
AF133659 AAD33045 O75027
AF078777 AAD47141 O75027
BC006323 AAH06323 O75027
BT009918 AAP88920 O75027
DQ890692 ABM81618  
EU176476 ABW03277  
AK001418 BAG50910 B3KM98
AK294657 BAG57829 B4DGL8
BX537833 CAD97847 Q7Z3K5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ABCB7 NP_004290 R.norvegicus Abcb7 302395   NP_997683 93
M.musculus Abcb7 11306 Gene Info NP_033722 92
A.gambiae AgaP_AGAP006364 1276974   XP_001688853 60
D.melanogaster ABCB7 38193   NP_728642 59
A.thaliana ATM3 835939   NP_200635 57
C.elegans abtm-1 171807   NP_001021830 54
A.thaliana ATM1 828981   NP_567813 54
A.thaliana ATM2 828980   NP_194591 52

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)