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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ZNF18, Zinc finger protein 18
Sequence ID:NM_144680
Entrez Gene ID:7566
Ensembl ID:ENSG00000154957

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17p11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 11880766 - 11896059

NM_144680 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
113001188076111882060
130114111188661311886723
141214961188742911887513
149715851189377811893866
158617751189429011894479
177622441189575911896227
224523661189887411898995
236726671190012611900426
266827671190058911900688

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5301103Full LengthBC036096zinc finger protein 18

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_653281  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_144680 NP_653281 P17022 zf-C2H2
KRAB
SCAN

Related Sequences

 
mRNAGenPeptSwissProt
BC036096 AAH36096 P17022
AY491053 AAS67595 P17022
EU446908 ABZ92437  
AK057783 BAB71570 Q96LU8
AK092656 BAC03939 P17022
AK127908 BAG54597 B3KXT5
X52342 CAA36568 P17022

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ZNF18 NP_653281 R.norvegicus Zfp18 303226   NP_001012008 80
M.musculus Zkscan6 52712 Gene Info NP_080383 78

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)