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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PRPH, peripherin
Sequence ID:NM_006262
RefSeqGene ID:NG_008354
Entrez Gene ID:5630
Ensembl ID:ENSG00000135406

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
AMYOTROPHIC LATERAL SCLEROSISANG
DCTN1
NEFH
SOD1

Cytogenetic Location (from UniGene)

Cytogenetic Location:12q12-q13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 49687484 - 49692465

NM_006262 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
16204968890849689527
6216814968996049690020
6827774969021449690309
7789454969067149690838
94610714969093049691055
107212924969113949691359
129313424969145949691508
134314224969174049691819
142318324969207049692479

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5247559Full LengthBC032703peripherin

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_006262 NP_006253 P41219  

Related Sequences

 
mRNAGenPeptSwissProt
BC032703 AAH32703 P41219
DQ893358 ABM84284  
DQ896677 ABM87676  
AK125587 BAG54218 B3KWQ6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PRPH NP_006253 R.norvegicus Prph 24688   NP_036765 97
M.musculus Prph 19132 Gene Info NP_038667 96

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)