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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TMEM104, Transmembrane protein 104
Sequence ID:NM_017728
Entrez Gene ID:54868
Ensembl ID:ENSG00000109066

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17q25.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 72772638 - 72835890

NM_017728 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1957277262172772715
962077277340272773513
2083297278162072781741
3304117278492772785008
4125087278633872786434
5095897278709472787174
5906897279115072791249
6907987279166272791770
7998927281588872815981
89347477283206572835919

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4825529Full LengthBC037278transmembrane protein 104

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_060198  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_017728 NP_060198 Q8NE00 Aa_trans

Related Sequences

 
mRNAGenPeptSwissProt
BC037278 AAH37278 Q8NE00
AK000262 BAA91039 Q8NE00
AK074029 BAB84855 Q8NE00
AK291159 BAF83848 A8K544
AK296621 BAG59229 B4DKL7
AL137521 CAB70787 Q8NE00

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TMEM104 NP_060198 M.musculus Tmem104 320534 Gene Info NP_001028565 90
R.norvegicus Tmem104 303670   XP_221104 89
A.gambiae AgaP_AGAP002099 1281361   XP_320941 49
D.melanogaster CG5262 40258   NP_649223 45
C.elegans C03A3.2 181315   NP_509879 42

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)