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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. APLP2, amyloid beta (A4) precursor-like protein 2
Sequence ID:NM_001142276
NM_001142277
NM_001142278
NM_001243299
NM_001642
NR_024515
NR_024516
RefSeqGene ID:NG_029770
Entrez Gene ID:334
Ensembl ID:ENSG00000084234

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:11q24Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 130014309 - 130014700

 Exon Info From UCSC:
NM_001142276
NM_001142277
NM_001142278
NM_001642

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2820109Full LengthBC000373amyloid beta (A4) precursor-like protein 2
3640033Full LengthBC004371amyloid beta (A4) precursor-like protein 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001633  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001142276 NP_001135748    
NM_001142277 NP_001135749    
NM_001142278 NP_001135750    
NM_001243299 NP_001230228    
NM_001642 NP_001633 Q06481 Kunitz_BPTI
A4_EXTRA

Related Sequences

 
mRNAGenPeptSwissProt
L09209 AAA35526 Q06481
L19597 AAA35601 Q06481
L23113 AAA36032 Q06481
L23114 AAA36130 Q06481
L27631 AAC41701 Q06481
S60099 AAC60589 Q06481
AF168956 AAD47291 Q06481
BC000373 AAH00373 Q06481
BC004371 AAH04371 Q06481
EU176627 ABW03428  
EU176299 ABW03750  
AK128162 BAG54641 B3KXX9
AK296765 BAG59345 B4DKY3
AK300378 BAG62113 B4DTV1
AK304736 BAG65497 B4E3I5
Z22572 CAA80295 Q06481

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens APLP2 NP_001135749 M.musculus Aplp2 11804 Gene Info NP_033821 92

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)