Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PBDC1, polysaccharide biosynthesis domain containing 1
Sequence ID:NM_016500
Entrez Gene ID:51260
Ensembl ID:ENSG00000102390

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:Xq13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:X: 75392763 - 75393514

NM_016500 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12337539277075393002
2342997539341975393484
3003597539472475394783
3605007539530775395447
5016127539671575396826
61311957539745075398032

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3528586Full LengthBC001220chromosome X open reading frame 26
6528202Full LengthBC051894chromosome X open reading frame 26

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_057584  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_016500 NP_057584 Q9BVG4 DUF757

Related Sequences

 
mRNAGenPeptSwissProt
BC001220 AAH01220 Q9BVG4
BC051894 AAH51894 Q9BVG4
HQ448025 ADQ32506  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CXorf26 NP_057584 R.norvegicus RGD1562502 363485   NP_001102288 88
M.musculus 2610029G23Rik 67683 Gene Info NP_080588 85
D.melanogaster CG7519 40377   NP_649318 52
A.gambiae AgaP_AGAP007575 1269654   XP_308299 48
S.cerevisiae YPL225W 855876   NP_015099 47
C.elegans Y54E5A.5 173330   NP_493553 45
S.pombe SPBC3E7.07c 2541002   NP_596094 41
N.crassa NCU09442 3874741   XP_958594 39

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)