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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CCR7, chemokine (C-C motif) receptor 7
Sequence ID:NM_001838
Entrez Gene ID:1236
Ensembl ID:ENSG00000126353

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17q12-q21.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 38710023 - 38721724

NM_001838 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
2520723871002238712069
207321223871514438715193
212322073872165138721735

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5180758Full LengthBC035343chemokine (C-C motif) receptor 7

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001829  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001838 NP_001829 P32248 7tm_1

Related Sequences

 
mRNAGenPeptSwissProt
L08176 AAA58615 P32248
L31581 AAA74231 P32248
BC035343 AAH35343 P32248
AY587876 AAT52232 P32248
DQ892114 ABM83040  
DQ895308 ABM86234  
AK312732 BAG35603 B2R6V6
AK127810 BAG54575 A0N0Q0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CCR7 NP_001829 M.musculus Ccr7 12775 Gene Info NP_031745 87
R.norvegicus Ccr7 287673   NP_955783 86

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta