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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. COX6A1, cytochrome c oxidase subunit VIa polypeptide 1
Sequence ID:NM_004373
Entrez Gene ID:1337
Ensembl ID:ENSG00000111775

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:12q24.2|12q24.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 120875892 - 120878340

NM_004373 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1129120875903120876031
130272120876181120876323
273545120878256120878528

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4300921Full LengthBC007723cytochrome c oxidase subunit VIa polypeptide 1
4664958Full LengthBC107861cytochrome c oxidase subunit VIa polypeptide 1
6654310Full LengthBC070186cytochrome c oxidase subunit VIa polypeptide 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004364  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_004373 NP_004364 P12074 COX6A

Related Sequences

 
mRNAGenPeptSwissProt
AF020589 AAC98895 O95101
BC007723 AAH07723 P12074
BC070186 AAH70186 P12074
BC107861 AAI07862 P12074
DQ893099 ABM84025  
DQ896371 ABM87370  
AK312009 BAG34947 P12074
X15341 CAA33392 Q9UEG9
P12074
HE647860 CCF23108 H6SG15

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens COX6A1 NP_004364 M.musculus Cox6a1 12861 Gene Info NP_031774 84
R.norvegicus Cox6a1 25282   NP_036946 83
A.gambiae AgaP_AGAP000851 1277364   XP_316821 59
D.melanogaster levy 37728   NP_611805 51

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)