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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TPGS1, tubulin polyglutamylase complex subunit 1
Sequence ID:NM_033513
Entrez Gene ID:91978
Ensembl ID:ENSG00000141933

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19p13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 507610 - 519654

NM_033513 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1348507496507843
3491113518888519652

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100015733Full LengthBC148687chromosome 19 open reading frame 20
3637796IncompleteBC009520chromosome 19 open reading frame 20
100016032BC152801chromosome 19 open reading frame 20

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_033513 NP_277048 Q6ZTW0  

Related Sequences

 
mRNAGenPeptSwissProt
BC009520 AAH09520 Q6ZTW0
BC148687 AAI48688  
BC152801 AAI52802  
AK126170 BAC86469 Q6ZTW0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TPGS1 NP_277048 M.musculus Gm16517 110012 Gene Info NP_683736 86
R.norvegicus Tpgs1 691093   NP_001103091 86

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)