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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SYTL2, synaptotagmin-like 2
Sequence ID:NM_001162951
NM_001162952
NM_001162953
NM_032379
NM_032943
NM_206927
NM_206928
NM_206929
NM_206930
RefSeqGene ID:NG_029712
Entrez Gene ID:54843
Ensembl ID:ENSG00000137501

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11q14Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 85405326 - 85522178

 Exon Info From UCSC:
NM_001162951
NM_001162952
NM_001162953
NM_032379
NM_032943
NM_206927
NM_206928
NM_206929
NM_206930

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9020439Full LengthBC136450synaptotagmin-like 2
9052634Full LengthBC144114synaptotagmin-like 2
9052635Full LengthBC144115synaptotagmin-like 2
3887570IncompleteBC015540synaptotagmin-like 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_115755  NP_116561  NP_996812  NP_996811  NP_996813  NP_996810  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001162951 NP_001156423 Q9HCH5  
NM_001162952 NP_001156424    
NM_001162953 NP_001156425    
NM_032379 NP_115755   C2
NM_032943 NP_116561   C2
NM_206927 NP_996810   C2
NM_206928 NP_996811   C2
NM_206929 NP_996812   C2
NM_206930 NP_996813   C2

Related Sequences

 
mRNAGenPeptSwissProt
BC015540 AAH15540 Q9HCH5
BC110315 AAI10316 Q9HCH5
BC136450 AAI36451 Q9HCH5
BC144114 AAI44115 Q9HCH5
BC144115 AAI44116 Q9HCH5
AY386362 AAR25619 Q9HCH5
EU035829 ABV82746 Q9HCH5
HQ447815 ADQ32299  
AK000170 BAA90989 Q9HCH5
AB046817 BAB13423 Q9HCH5
AK024872 BAB15030 Q9HCH5
AK074737 BAC11170 Q9HCH5
AK124754 BAC85937 Q9HCH5
AK127504 BAC87010 Q6ZSE3
AK131365 BAD18516 Q9HCH5
AK092121 BAG52485 Q9HCH5
AK296224 BAG58947 Q9HCH5
AK296740 BAG59325 Q9HCH5
AK298604 BAG60788 Q9HCH5
AJ303364 CAC33886 Q9BQS1
AL834422 CAD39083 Q9HCH5

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)