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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SLC22A6, solute carrier family 22 (organic anion transporter), member 6
Sequence ID:NM_004790
NM_153276
NM_153277
NM_153278
NM_153279
Entrez Gene ID:9356
Ensembl ID:ENSG00000197901

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11q12.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 62744073 - 62752429

 Exon Info From UCSC:
NM_004790
NM_153276
NM_153277
NM_153278

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5190748Full LengthBC033682solute carrier family 22 (organic anion transporter), member 6

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_695010  NP_695008  NP_004781  NP_695009  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_004790 NP_004781 Q4U2R8 MFS_1
NM_153276 NP_695008   MFS_1
NM_153277 NP_695009   MFS_1
NM_153278 NP_695010   MFS_1

Related Sequences

 
mRNAGenPeptSwissProt
AF057039 AAC70004 Q4U2R8
AF104038 AAD10052 Q4U2R8
AF097490 AAD19356 Q4U2R8
AF124373 AAD55356 Q4U2R8
BC033682 AAH33682 Q4U2R8
DQ892080 ABM83006  
DQ895273 ABM86199  
AB009697 BAA75072 Q4U2R8
AB009698 BAA75073 Q4U2R8
AK055764 BAG51569 B3KP57
AK091879 BAG52435 B3KRM3
AK298374 BAG60612 B4DPK0
AJ251529 CAB94830 Q4U2R8
AJ271205 CAB97249 Q4U2R8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SLC22A6 NP_695008 R.norvegicus Slc22a6 29509   NP_058920 88
M.musculus Slc22a6 18399 Gene Info NP_032792 86

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)