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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. RAB2A, RAB2A, member RAS oncogene family
Sequence ID:NM_001242644
NM_002865
Entrez Gene ID:5862
Ensembl ID:ENSG00000104388

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:8q12.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:8: 61497293 - 61534439

Transcript StartTranscript EndChromosomal Start Chromosomal End
12546142955861429811
2553266147141061471481
3273946148460461484671
3954776149676661496848
4785706149728161497373
5716826150441661504527
6837516153113861531206
75211486153323261533628

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2966694Full LengthBC008929RAB2A, member RAS oncogene family

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002856  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001242644 NP_001229573    
NM_002865 NP_002856 P61019 Ras

Related Sequences

 
mRNAGenPeptSwissProt
M28213 AAA60241 P61019
AF070629 AAC25389 O75546
BC008929 AAH08929 P61019
AF498930 AAM21078 P61019
BT019695 AAV38501 P61019
HQ447940 ADQ32424  
AK312344 BAG35265 P61019
AK297576 BAG59967 P61019
X12953 CAA31411 P61019

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RAB2A NP_002856 M.musculus Rab2a 59021 Gene Info NP_067493 99
R.norvegicus Rab2a 65158   NP_113906 99
A.gambiae AgaP_AGAP005393 1276094   XP_556035 90
D.melanogaster Rab2 35577   NP_477090 90
C.elegans unc-108 171956   NP_491233 89
A.thaliana RABB1C 827428   NP_193450 79
P.falciparum Rab2 811352   XP_001350706 77
N.crassa NCU01647 3872424   XP_956269 45

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta