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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. LPCAT1, lysophosphatidylcholine acyltransferase 1
Sequence ID:NM_024830
Entrez Gene ID:79888
Ensembl ID:ENSG00000153395

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:5p15.33Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 1463765 - 1523959

 Exon Info From UCSC:
NM_024830

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3138846IncompleteBC002543lysophosphatidylcholine acyltransferase 1
3343363IncompleteBC020166lysophosphatidylcholine acyltransferase 1
100014325BC140367lysophosphatidylcholine acyltransferase 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_079106  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_024830 NP_079106 Q8NF37 EC 2.3.1.23
EC 2.3.1.67
efhand
Acyltransferase

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC020166 AAH20166 Q8NF37 EC 2.3.1.23
EC 2.3.1.67
BC140367 AAI40368 Q8NF37 EC 2.3.1.23
EC 2.3.1.67
AF530061 AAQ09945 Q8NF37 EC 2.3.1.23
EC 2.3.1.67
AK022499 BAB14061 Q8NF37 EC 2.3.1.23
EC 2.3.1.67
AK022505 BAB14065 Q8NF37 EC 2.3.1.23
EC 2.3.1.67
AK090444 BAC03425 Q8NF37 EC 2.3.1.23
EC 2.3.1.67
AB244719 BAE94688 Q8NF37 EC 2.3.1.23
EC 2.3.1.67
AL831864 CAD38556 Q8NF37 EC 2.3.1.23
EC 2.3.1.67

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens LPCAT1 NP_079106 M.musculus Lpcat1 210992 Gene Info NP_663351 88
R.norvegicus Lpcat1 361467   NP_001094205 88
D.melanogaster CG32699 31899   NP_001036265 39
A.gambiae AgaP_AGAP000596 1271631   XP_310482 38

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)