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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SPDL1, spindle apparatus coiled-coil protein 1
Sequence ID:NM_017785
Entrez Gene ID:54908
Ensembl ID:ENSG00000040275

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5q35.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 169010746 - 169031776

 Exon Info From UCSC:
NM_017785

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4102558Full LengthBC012568coiled-coil domain containing 99

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_017785 NP_060255 Q96EA4  

Related Sequences

 
mRNAGenPeptSwissProt
AF269167 AAG01408 Q96EA4
BC012568 AAH12568 Q96EA4
AY517557 AAT44530 Q96EA4
JF432342 ADZ15559  
AK000371 BAA91119 Q96EA4
AK074227 BAB85022 Q96EA4
AK304623 BAG65405 B4E393

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CCDC99 NP_060255 R.norvegicus Ccdc99 303037   NP_001029310 74
M.musculus Ccdc99 70385 Gene Info NP_081687 74

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)