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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. EPB42, erythrocyte membrane protein band 4.2
Sequence ID:NM_000119
NM_001114134
RefSeqGene ID:NG_011505
Entrez Gene ID:2038
Ensembl ID:ENSG00000166947

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
SPHEROCYTOSIS, HEREDITARY, TYPE 5 

Cytogenetic Location (from UniGene)

Cytogenetic Location:15q15-q21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:15: 43489427 - 43513097

 Exon Info From UCSC:
NM_000119
NM_001114134

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40001236Full LengthBC096093erythrocyte membrane protein band 4.2
40001239Full LengthBC099627erythrocyte membrane protein band 4.2
40001240Full LengthBC096094erythrocyte membrane protein band 4.2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000110  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_000119 NP_000110   Transglut_N
Transglut_C
Transglut_core
NM_001114134 NP_001107606 P16452  

Related Sequences

 
mRNAGenPeptSwissProt
M29399 AAA35798 P16452
M30647 AAA36401 P16452
M30646 AAA36402 P16452
M60298 AAA74589 P16452
BC096093 AAH96093 P16452
BC096094 AAH96094 P16452
BC096095 AAH96095 Q4VB96
BC099627 AAH99627 Q4KKX0
AK297146 BAH12509 B7Z4C3
AK297663 BAH12644 B7Z4Q8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens EPB42 NP_000110 M.musculus Epb4.2 13828 Gene Info NP_038541 73
R.norvegicus Epb42 362202   NP_001102060 73

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)