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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. PAPSS1, 3'-phosphoadenosine 5'-phosphosulfate synthase 1
Sequence ID:NM_005443
Entrez Gene ID:9061
Ensembl ID:ENSG00000138801

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:4q24Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:4: 108535404 - 108641335

 Exon Info From UCSC:
NM_005443

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3869484Full LengthBC0113923'-phosphoadenosine 5'-phosphosulfate synthase 1
5556165Full LengthBC0506273'-phosphoadenosine 5'-phosphosulfate synthase 1
5492659IncompleteBC0325133'-phosphoadenosine 5'-phosphosulfate synthase 1
5770498IncompleteBC0409403'-phosphoadenosine 5'-phosphosulfate synthase 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005434  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_005443 NP_005434 O43252
Q6IAX6
EC 2.7.7.4
EC 2.7.1.25
APS_kinase
ATP-sulfurylase

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF033026 AAC28429 O43252
Q6IAX6
EC 2.7.7.4
EC 2.7.1.25
AF016496 AAD09325 O43252 EC 2.7.7.4
EC 2.7.1.25
AF105227 AAF40236 O43252 EC 2.7.7.4
EC 2.7.1.25
BC011392 AAH11392 O43252 EC 2.7.7.4
EC 2.7.1.25
BC032513 AAH32513 Q05BW9  
BC050627 AAH50627 O43252
Q6IAX6
EC 2.7.7.4
EC 2.7.1.25
DQ891043 ABM81969    
DQ894222 ABM85148    
AK292774 BAF85463 Q6IAX6  
AK297981 BAH12699 B7Z4W3  
Y10387 CAA71413 O43252 EC 2.7.7.4
EC 2.7.1.25
CR457028 CAG33309 O43252
Q6IAX6
EC 2.7.7.4
EC 2.7.1.25

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PAPSS1 NP_005434 M.musculus Papss1 23971 Gene Info NP_035993 99
R.norvegicus Papss1 295443   NP_001099941 97
D.melanogaster Papss 40167   NP_730459 65
A.gambiae AgaP_AGAP001256 1281917   XP_321893 63
A.thaliana APS2 838580   NP_564099 56

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)