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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PCSK5, proprotein convertase subtilisin/kexin type 5
Sequence ID:NM_001190482
NM_006200
RefSeqGene ID:NG_029445
Entrez Gene ID:5125
Ensembl ID:ENSG00000099139

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9q21.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 78808309 - 78810804

 Exon Info From UCSC:
NM_001190482
NM_006200

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4562734Full LengthBC012064proprotein convertase subtilisin/kexin type 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006191  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001190482 NP_001177411 Q92824  
NM_006200 NP_006191   Peptidase_S8
P_proprotein

Related Sequences

 
mRNAGenPeptSwissProt
U49114 AAA91807 Q92824
U56387 AAC50643 Q92824
BC012064 AAH12064 Q92824
DQ892327 ABM83253  
DQ895531 ABM86457  
AK056202 BAG51646 B3KPD4
AL834522 CAD39178 Q92824
AM393199 CAL38077  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PCSK5 NP_001177411 R.norvegicus Pcsk5 116548   XP_342033 83
M.musculus Pcsk5 18552 Gene Info NP_001177412 82
D.melanogaster Fur2 32604   NP_001162774 44
A.gambiae AgaP_AGAP002915 1273048   XP_311989 42

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)