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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. SRPR, signal recognition particle receptor (docking protein)
Sequence ID:NM_001177842
NM_003139
Entrez Gene ID:6734
Ensembl ID:ENSG00000182934

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:11q24.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 126132828 - 126137188

 Exon Info From UCSC:
NM_001177842
NM_003139

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3453825Full LengthBC009110signal recognition particle receptor (docking protein)
3528505Full LengthBC001162signal recognition particle receptor (docking protein)
3877676Full LengthBC013583signal recognition particle receptor (docking protein)
2963671IncompleteBC008077signal recognition particle receptor ('docking protein')

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003130  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001177842 NP_001171313    
NM_003139 NP_003130 P08240 SRP54
SRP-alpha_N

Related Sequences

 
mRNAGenPeptSwissProt
BC001162 AAH01162 P08240
BC009110 AAH09110 P08240
BC013583 AAH13583 P08240
DQ891476 ABM82402  
DQ894664 ABM85590  
AK312377 BAG35295 P08240
AK303379 BAG64435 B4E0H3
X06272 CAA29608 P08240
CR457025 CAG33306 Q6IAX9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SRPR NP_003130 R.norvegicus Srpr 315548   NP_001029322 98
M.musculus Srpr 67398 Gene Info NP_080406 97
A.gambiae AgaP_AGAP010894 1271053   XP_309798 61
D.melanogaster Gtp-bp 47251   NP_524887 55
C.elegans F38A1.8 185438   NP_741303 54
A.thaliana AT4G30600 829183   NP_194789 47
S.cerevisiae SRP101 851886   NP_010578 43
S.pombe SPBC3B9.03 2540909   NP_596660 40
P.falciparum PF13_0350 814309   XP_001350377 40
N.crassa NCU11187 5847822   XP_001728457 38

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)