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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. SUPT3H, Suppressor of Ty 3 homolog (S. cerevisiae)
Sequence ID:NM_181356
NM_003599
NM_001261823
Entrez Gene ID:8464
Ensembl ID:ENSG00000196284

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6p21.1-p21.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 44797552 - 45333038

 Exon Info From UCSC:
NM_181356
NM_003599

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5758833Full LengthBC050384suppressor of Ty 3 homolog (S. cerevisiae)
5768301IncompleteBC035816suppressor of Ty 3 homolog (S. cerevisiae)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_852001  NP_003590  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001261823 NP_001248752    
NM_003599 NP_003590   TFIID-18kDa
NM_181356 NP_852001   TFIID-18kDa

Related Sequences

 
mRNAGenPeptSwissProt
AF073930 AAC36098 O75486
AF069734 AAC39904 O75486
BC035816 AAH35816 Q5U608
BC050384 AAH50384 O75486
EU446927 ABZ92456  
AK313874 BAG36602 O75486
AK303838 BAG64782 B4E1H0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SUPT3H NP_003590 M.musculus Supt3h 109115 Gene Info NP_848767 91
R.norvegicus Supt3h 685697   XP_001064890 91
D.melanogaster Spt3 41461   NP_650146 35
A.gambiae AgaP_AGAP011670 1280969   XP_320843 30

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)