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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CDH8, cadherin 8, type 2
Sequence ID:NM_001796
Entrez Gene ID:1006
Ensembl ID:ENSG00000150394

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16q22.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 61687421 - 62070036

 Exon Info From UCSC:
NM_001796

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8322468Full LengthBC113416cadherin 8, type 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001787  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001796 NP_001787 P55286 Cadherin
Cadherin_C

Related Sequences

 
mRNAGenPeptSwissProt
L34060 AAA35628 P55286
BC113416 AAI13417 P55286
HQ258504 ADR83258  
AB035305 BAA87419 P55286
AB074170 BAE45735 Q3LID3
AK124734 BAG54083 P55286

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CDH8 NP_001787 M.musculus Cdh8 12564 Gene Info NP_031693 97
R.norvegicus Cdh8 84408   NP_445845 97
D.melanogaster CadN2 35071   NP_001036368 35

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)