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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. FAM109B, Family with sequence similarity 109, member B
Sequence ID:NM_001002034
Entrez Gene ID:150368
Ensembl ID:ENSG00000177096

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:22q13.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:22: 42473456 - 42475442

NM_001002034 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1914247025442470344
921734247157442471655
17423314247328342475440

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40030677Full LengthBC104175family with sequence similarity 109, member B
40030679Full LengthBC104176family with sequence similarity 109, member B
5188623IncompleteBC029776family with sequence similarity 109, member B

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001002034  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001002034 NP_001002034 Q6ICB4 PH

Related Sequences

 
mRNAGenPeptSwissProt
BC029776 AAH29776 Q6ICB4
BC104175 AAI04176 Q6ICB4
BC104176 AAI04177 Q6ICB4
EU832537 ACE86939  
EU832455 ACE87627  
CR456454 CAG30340 Q6ICB4
CU013004 CAK54435  
CU013292 CAK54734  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens FAM109B NP_001002034 R.norvegicus Fam109b 688685   NP_001123983 79
M.musculus Fam109b 338368 Gene Info NP_796365 78

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)