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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. PPP2R5C, protein phosphatase 2, regulatory subunit B', gamma
Sequence ID:NM_001161725
NM_001161726
NM_002719
NM_178586
NM_178587
NM_178588
Entrez Gene ID:5527
Ensembl ID:ENSG00000078304

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:14q32.31Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:14: 102276279 - 102391606

 Exon Info From UCSC:
NM_001161725
NM_001161726
NM_002719
NM_178586
NM_178587

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4855950Full LengthBC016183protein phosphatase 2, regulatory subunit B', gamma isoform

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_848701  NP_848702  NP_002710  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001161725 NP_001155197    
NM_001161726 NP_001155198    
NM_002719 NP_002710 Q13362 B56
NM_178586 NP_848701   B56
NM_178587 NP_848702   B56

Related Sequences

 
mRNAGenPeptSwissProt
L42375 AAC37603 Q96L51
Q13362
U37352 AAC50387 Q7L7W2
Q13362
BC016183 AAH16183 Q96B13
D26445 BAA05465 Q13362
AK131391 BAD18542 Q13362
AK302470 BAG63760 B4DYJ8
AB451341 BAG70155 Q13362
Z69030 CAA93154 Q13362
BX248254 CAD62582 Q86U13

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PPP2R5C NP_001155198 N.crassa NCU03786 3877266   XP_961132 60
S.cerevisiae RTS1 854179   NP_014657 55
S.pombe par1 2539379   NP_588206 55
A.thaliana AT1G13460 837906   NP_172803 51
A.thaliana AT3G26020 822199   NP_001030770 51

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)