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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SFXN5, Sideroflexin 5
Sequence ID:NM_144579
Entrez Gene ID:94097
Ensembl ID:ENSG00000144040

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:Unknown

Chromosomal Position (from UCSC)

Chromosomal Position:2: 73246575 - 73298418

 Exon Info From UCSC:
NM_144579

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40024811Full LengthBC101311sideroflexin 5
40024812Full LengthBC101312sideroflexin 5
40024813Full LengthBC101313sideroflexin 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_653180  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_144579 NP_653180 Q8TD22 Mtc

Related Sequences

 
mRNAGenPeptSwissProt
BC101311 AAI01312 Q8TD22
BC101312 AAI01313 Q8TD22
BC101313 AAI01314 Q8TD22
AY044437 AAK95826 Q8TD22
EU219624 ACA14136 B6RHJ8
AK289731 BAF82420 Q8TD22
AK315861 BAF98752 B0AZS0
AK294751 BAG57890 B4DGS9
AK295637 BAG58510 B4DIJ8
XM_002342226 XP_002342267  
XM_002345528 XP_002345569  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SFXN5 NP_653180 M.musculus Sfxn5 94282 Gene Info NP_848754 98
R.norvegicus Sfxn5 261737   NP_695210 98
C.elegans sfxn-5 174303   NP_001022022 51
S.pombe SPAC17G6.15c 2542199   NP_594262 43
S.cerevisiae FSF1 854445   NP_014914 41
N.crassa NCU00227 3873900   XP_957698 41

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)