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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PYGB, phosphorylase, glycogen; brain
Sequence ID:NM_002862
Entrez Gene ID:5834
Ensembl ID:ENSG00000100994

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, adrenal medulla, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, stem cell, stomach, synovium, t-cell, testis, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:20p11.2-p11.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:20: 25228747 - 25278647

 Exon Info From UCSC:
NM_002862

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3877951Full LengthBC017045phosphorylase, glycogen; brain
3916938Full LengthBC030795phosphorylase, glycogen; brain

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002853  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_002862 NP_002853 P11216 EC 2.4.1.1 Phosphorylase

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
J03544 AAA59597 P11216 EC 2.4.1.1
U47025 AAB60395 P11216 EC 2.4.1.1
BC017045 AAH17045 P11216 EC 2.4.1.1
BC030795 AAH30795 P11216 EC 2.4.1.1
AF432222 AAL99928 Q8TDG6  
DQ894674 ABM85600    
EU176283 ABW03734    
AB209080 BAD92317 Q59GM9  
AK299697 BAG61600 B4DSD8  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PYGB NP_002853 M.musculus Pygb 110078 Gene Info NP_722476 96
R.norvegicus Pygb 25739   NP_037320 95
S.cerevisiae GPH1 856289   NP_015486 52
N.crassa NCU07027 3878330   XP_962166 50

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)