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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. GRIK5, Glutamate receptor, ionotropic, kainate 5
Sequence ID:NM_002088
Entrez Gene ID:2901
Ensembl ID:ENSG00000105737

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19q13.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 42502472 - 42569406

 Exon Info From UCSC:
NM_002088

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100068271Full LengthBC168375glutamate receptor, ionotropic, kainate 5
4122443IncompleteBC037358glutamate receptor, ionotropic, kainate 5
5732938IncompleteBC052975glutamate receptor, ionotropic, kainate 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002079  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_002088 NP_002079 Q16478 Lig_chan
SBP_bac_3
ANF_receptor

Related Sequences

 
mRNAGenPeptSwissProt
S40369 AAB22591 Q16478
BC168375 AAI68375  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens GRIK5 NP_002079 R.norvegicus Grik5 24407   NP_113696 99
M.musculus Grik5 14809 Gene Info NP_032194 99

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)