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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ATM, ataxia telangiectasia mutated
Sequence ID:NM_000051
NM_138292
NM_138293
RefSeqGene ID:NG_009830
Entrez Gene ID:472
Ensembl ID:ENSG00000149311

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
ATAXIA-TELANGIECTASIA 
BREAST CANCERAKT1
BARD1
BRCA1
BRCA2
BRIP1
CASP8
CDH1
CHEK2
CHEK2
HMMR
KRAS
NQO2
NQO2
PALB2
PHB
PIK3CA
PIK3CA
PPM1D
RAD51
RAD54L
RB1CC1
SLC22A18
TP53
TP53
TSG101
XRCC3
XRCC3

Cytogenetic Location (from UniGene)

Cytogenetic Location:11q22-q23Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 108123547 - 108124723

 Exon Info From UCSC:
NM_000051
NM_138292

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9021166Full LengthBC137169ataxia telangiectasia mutated
3950747IncompleteBC007023ataxia telangiectasia mutated (includes complementation groups A, C and D)
100013451IncompleteBC152389ataxia telangiectasia mutated

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000042  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_000051 NP_000042     PI3_PI4_kinase
FAT
FATC
NM_002519 NP_002510 Q14207    

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
U26455 AAA86520 Q13315 EC 2.7.11.1
U58852 AAB02735 Q14207  
U33841 AAC50289 Q13315 EC 2.7.11.1
BC040356 AAH40356 Q14207  
BC050561 AAH50561 Q14207  
BC061584 AAH61584 Q6P7P1  
BC136270 AAI36271 B9EG70  
BC137169 AAI37170 Q13315 EC 2.7.11.1
BC152385 AAI52386 Q96QM9  
BC152389 AAI52390 A8WFP7  
AF035328 AAM09295 Q8TDS0  
BT006764 AAP35410 Q96QM9  
HM437232 ADN43064 E2I6F3  
D83243 BAA11861 Q14207  
AB209133 BAD92370 Q59GH6  
AK290020 BAF82709 Q14207  
AK291687 BAF84376 Q14207  
AK299843 BAG61705 B4DSP3  
AK301256 BAG62823 B4DVW1  
X91196 CAA62602 Q7KYL7  
X91196 CAA62603 Q13315 EC 2.7.11.1
X97186 CAA65824 Q14207  
Y08455 CAA69711    
CR749436 CAH18274 Q68DE6  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ATM NP_000042 M.musculus Atm 11920 Gene Info NP_031525 84
R.norvegicus Atm 300711   NP_001100291 84

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta