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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. PPP1R7, protein phosphatase 1, regulatory subunit 7
Sequence ID:NM_002712
Entrez Gene ID:5510
Ensembl ID:ENSG00000115685

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, t-cell, testis, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:2q37.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 242089873 - 242122439

NM_002712 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
767242089901242089961
68196242092890242093018
197252242097221242097276
253318242097898242097963
319449242098627242098757
450612242099746242099908
613729242102699242102815
730834242105751242105855
835921242109195242109281
9221299242122061242122438

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2985840Full LengthBC000910protein phosphatase 1, regulatory (inhibitor) subunit 7
3528281Full LengthBC013001protein phosphatase 1, regulatory (inhibitor) subunit 7
3858906Full LengthBC012397protein phosphatase 1, regulatory (inhibitor) subunit 7

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002703  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_002712 NP_002703 Q15435 LRR_1

Related Sequences

 
mRNAGenPeptSwissProt
BC000910 AAH00910 Q15435
BC012397 AAH12397 Q15435
BC013001 AAH13001 Q15435
BT007296 AAP35960 Q15435
BT020134 AAV38936 Q15435
AK294043 BAG57395 Q15435
Z50749 CAA90626 Q15435

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PPP1R7 NP_002703 R.norvegicus Ppp1r7 301618   NP_001009825 95
M.musculus Ppp1r7 66385 Gene Info NP_075689 94
A.gambiae AgaP_AGAP009839 1279257   XP_318952 57
D.melanogaster sds22 42091   NP_650619 54
N.crassa NCU08385 3880081   XP_963932 51
S.cerevisiae SDS22 853641   NP_012728 49
S.pombe sds22 2543597   NP_593824 49
C.elegans C06A8.6 174253   NP_495634 44
A.thaliana AT5G19680 832088   NP_197469 41

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)