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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SLC27A1, solute carrier family 27 (fatty acid transporter), member 1
Sequence ID:NM_198580
Entrez Gene ID:376497
Ensembl ID:ENSG00000130304

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19p13.11Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 17610692 - 17622301

 Exon Info From UCSC:
NM_198580

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30341529Full LengthBC059399solute carrier family 27 (fatty acid transporter), member 1
3917549IncompleteBC013149solute carrier family 27 (fatty acid transporter), member 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_940982  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_198580 NP_940982 Q6PCB7 AMP-binding

Related Sequences

 
mRNAGenPeptSwissProt
BC013149 AAH13149 Q96DY3
BC059399 AAH59399 Q6PCB7
AK131101 BAC85151 Q6ZNJ4
AK125289 BAC86116 Q6ZUV2
AK294238 BAH11711 B7Z225
AK296355 BAH12327 B7Z3U1
AK299852 BAH13148 B7Z662
AK315935 BAH14306 B7Z225
XM_003118791 XP_003118839  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SLC27A1 NP_940982 R.norvegicus Slc27a1 94172   NP_446032 90
M.musculus Slc27a1 26457 Gene Info NP_036107 89

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)