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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TCP1, t-complex 1
Sequence ID:NM_001008897
NM_030752
Entrez Gene ID:6950
Ensembl ID:ENSG00000120438

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:6q25.3-q26Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 160209468 - 160210704

 Exon Info From UCSC:
NM_001008897
NM_030752

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3349237Full LengthBC000665t-complex 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001008897  NP_110379  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001008897 NP_001008897   Cpn60_TCP1
NM_030752 NP_110379 P17987 Cpn60_TCP1

Related Sequences

 
mRNAGenPeptSwissProt
BC000665 AAH00665 P17987
BT006969 AAP35615 P17987
DQ893771 ABM84697  
DQ890600 ABM92217  
X52882 CAA37064 P17987

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TCP1 NP_110379 R.norvegicus Tcp1 24818   NP_036802 98
M.musculus Tcp1 21454 Gene Info NP_038714 96
A.gambiae AgaP_AGAP004238 1274083   XP_313154 75
D.melanogaster T-cp1 42649   NP_732748 74
C.elegans cct-1 174318   NP_495722 69
A.thaliana TCP-1 821544   NP_188640 67
S.pombe cct1 2539691   NP_595949 67
S.cerevisiae TCP1 851798   NP_010498 65
N.crassa NCU04448 3872053   XP_955906 64
P.falciparum PF11_0331 810878   XP_001348002 60

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)