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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Hs. NUP85, nucleoporin 85kDa
Sequence ID:NM_024844
Entrez Gene ID:79902
Ensembl ID:ENSG00000125450

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:17q25.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 73201856 - 73231774

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3349383Full LengthBC000697nucleoporin 85kDa

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_079120  

Protein Infomation

NM_024844 NP_079120 Q9BW27 Nucleopor_Nup85

Related Sequences

BC000697 AAH00697 Q9BW27
AF498261 AAM18528 Q9BW27
AF514995 AAM76706 Q9BW27
AK022611 BAB14130 Q9BW27
AK124501 BAG54043 B3KW81
AK297574 BAG59965 B4DMQ3
AK298519 BAG60723 B4DPW1
AK302426 BAG63729 B4DYG7
AK295694 BAH12158 B7Z3C2
AL833893 CAD38749 Q9BW27

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
H.sapiens NUP85 NP_079120 R.norvegicus Nup85 287830   NP_001020572 93
M.musculus Nup85 445007 Gene Info NP_001002929 92
D.melanogaster Nup75 37078   NP_611300 34
A.gambiae AgaP_AGAP012362 1280349   XP_320194 33
A.thaliana AT4G32910 829427   NP_567908 28
C.elegans npp-2 172611   NP_492256 24

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta